Susan (Yinghui) Sui

Bioinformatics Programmer

I obtained my B.S. degree in geochemistry from Peking University and my Ph.D. from Purdue University. In the Sander lab I analyze Next Generation sequence (NGS) data, including RNA-seq, ChIP-seq, and ATAC-seq data. For each data type, I perform data quality control, integrated data analysis, and data visualization. In addition to data analysis, I manage the lab’s NGS database and data server.

 

Publications:

Zeng C*, Mulas F*, Sui Y, Guan T, Miller N, Tan Y, Liu F, Jin W, Carrano AC, Huising MO, Shirihai OS, Yeo GW, and Sander M. (2017) Pseudotemporal ordering of single cells reveals metabolic control of postnatal beta cell proliferation. Cell Metabolism 25: 1160-1175. *equal contributors

Li Z, Araoka T, Wu J, Liao H, Li M, Lazo M, Zhou B, Sui Y, Wu M, Tamura I, Xia Y, Beyret E, Esteban C, Guillen P, Campistol J, and Izpisua Belmonte J. (2016) 3D culture supports long-term expansion of mouse and human nephrogenic progenitors. Cell Stem Cell 19(4): 516-529.

Jiang Y, Frankenberger JR, Sui Y, and Bowling LC. (2014) Estimation of nonpoint source nitrate concentrations in Indiana rivers based on agricultural drainage in the watershed. JAWRA 50(6):1 501-1514.

Sui Y and Frankenberger JR (2008) Nitrate loss from subsurface drains in an agriculture watershed using SWAT2005. Trans. ASABE 51(4): 1263-1272.

Chen Y, Pirajno F, and Sui Y (2005) Geology and D-O-C Isotope Systematics of the Tieluping Silver Deposit, Henan, China: Implications for Ore Genesis. ACTA GEOLOGICA SINICA 79 (1): 106-119.

Chen Y, Pirajno F, and Sui Y. (2004) Isotope geochemistry of the Tieluping silver-lead deposit, Henan, China: A case study of orogenic silver-dominated deposits and related tectonic setting. Mineralium Deposita (39): 560-575.

Sui Y, Wang H, Gao X, and Chen H. (2000) Ore fluid of the Tieluping silver deposit of Henan Province and its illustration of the tectonic model for Collisional petrogenesis metallogenesis and fluidization. Science. China (D), 43(supp): 108-121.